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Bharti, Kanchan, Gurudutt Dubey, Manish Kumar, Abhishek Jha, Mansi Upadhyay, Pramod S. Mali, Ashutosh Kumar, Prasad V. Bharatam, and Brahmeshwar Mishra. A multifaceted approach for grading of polymers for the development of stable amorphous solid dispersion of Riluzole. 2023.Journal of Drug Delivery Science and Technology 90:105158, doi:org/10.1016/j.jddst.2023.105158.

Jain, N., Patel, B., Hanawal, M. et al. Machine learning for predicting diabetic metabolism in the Indian population using polar metabolomic and lipidomic features. 2024 Metabolomics 20, 1.doi:org/10.1007/s11306-023-02066-y.

Upadhyay, Mansi, Ramakrishna V. Hosur, Abhishek Jha, Kanchan Bharti, Pramod S. Mali, Akash Kumar Jha, Brahmeshwar Mishra, and Ashutosh Kumar. Myricetin encapsulated chitosan nanoformulation for management of type 2 diabetes: Preparation, optimization, characterization and in vivo activity.2023 Biomaterials Advances 153: 213542.doi:org/10.1016/j.bioadv.2023.213542. 

Panigrahi R, Krishnan R, Singh JS, Padinhateeri R, Kumar A. SUMO1 hinders α-Synuclein fibrillation by inducing structural compaction. Protein Sci. 2023 May;32(5):e4632. doi: 10.1002/pro.4632. PMID: 36974517; PMCID: PMC10108436.

Pujahari SR, Mali PS, Purusottam RN, Kumar A. Combined Liquid-State and Solid-State Nuclear Magnetic Resonance at Natural Abundance for Comparative Higher Order Structure Assessment in the Formulated-State of Biphasic Biopharmaceutics. Anal Chem. 2023 May 8. doi: 10.1021/acs.analchem.2c05485. Epub ahead of print. PMID: 37154614.

Ghanbarnezhad, Mohammad Mehdi, Mohammad Bagher Shahsavani, Pramod S. Mali, Mansi Upadhyay, Ashutosh Kumar, Rawayh Muslim Albaghlani, Ali Niazi, and Reza Yousefi. Developing a novel exenatide-based incretin mimic (αB-Ex): Expression, purification and structural-functional characterization. Biochimica et Biophysica Acta (BBA)-General Subjects 2022, 1866(7), 130150. doi:org/10.1016/j.bbagen.2022.130150. 

Khosravi, Fatemeh, Mansi Upadhyay, Ashutosh Kumar, Mohammad Bagher Shahsavani, Mohsen Akbarian, Haniyeh Najafi, Ali Mohammad Tamaddon, and Reza Yousefi. A novel method for the chaperone aided and efficient production of human proinsulin in the prokaryotic system. Journal of Biotechnology, 2022 346,35-46. doi:org/10.1016/j.jbiotec.2022.01.002 .

Bhattacharya A, Shukla VK, Kachariya N, Preeti, Sehrawat P, Kumar A. Disorder in the Human Skp1 Structure is the Key to its Adaptability to Bind Many Different Proteins in the SCF Complex Assembly. J Mol Biol. 2022 Sep 15;434(21):167830. doi: 10.1016/j.jmb.2022.167830. Epub ahead of print. PMID: 36116539.

Agadi N, Maity A, Jha AK, Chakrabarti R, Kumar A. Distinct mode of membrane interaction and disintegration by diverse class of antimicrobial peptides. Biochim Biophys Acta Biomembr. 2022 Dec 1;1864(12):184047. doi: 10.1016/j.bbamem.2022.184047. Epub 2022 Sep 12. PMID: 36100074.

Sehrawat P, Shobhawat R, Kumar A. Catching Nucleosome by Its Decorated Tails Determines Its Functional States. Front Genet. 2022 Jul 14;13:903923. doi: 10.3389/fgene.2022.903923. PMID: 35910215; PMCID: PMC9329655.

Singh JS, Sajeev T K, Panigrahi R, Cherry P, Panchakshari NA, Shukla VK, Kumar A*, Mishra RK. Implications of critical node-dependent unidirectional cross-talk of Plasmodium SUMO pathway proteins. Biophys J. 2022 Apr 19;121(8):1367-1380. doi: 10.1016/j.bpj.2022.03.022. Epub 2022 Mar 21. PMID: 35331687; PMCID: PMC9072691.

Shukla S, Agarwal P, Kumar A. Disordered regions tune order in chromatin organization and function. Biophys Chem. 2022 Feb;281:106716. doi: 10.1016/j.bpc.2021.106716. Epub 2021 Nov 17. PMID: 34844028.

Shukla, Shivangi, and Ashutosh Kumar. Centromere Chromatin Dynamics at a Glance. Epigenomes 6, no. 4 (2022): 39.doi:10.3390/epigenomes6040039.

Dey A, Mitra D, Rachineni K, Paithankar H, Khatri LR, Vajpai N, Kumar A. Mapping of methyl epitopes of a peptide-drug with its receptor by 2D STDD-Methyl TROSY NMR. Chembiochem. 2022 Oct 13. doi: 10.1002/cbic.202200489. Epub ahead of print. PMID: 36227643.

Joshi S, Khatri L K, Kumar A*, Rathore S A. Monitoring size and oligomeric-state distribution of therapeutic mAbs by NMR and DLS: Trastuzumab as a case study J Pharm Biomed Anal 2021, 195, 113841. doi: 10.1016/j.jpba.2020.113841

Sarkar S, Purusottom N R, Kumar A, Khaneja N. Chirp pulse sequences for broadband π rotation J Magn Reson. 2021, 38, 107002. doi: 10.1016/j.jmr.2021.107002

Pravin N, Kumar R, Tripathi S, Kumar P, Mohite GM, Navalkar A, Panigrahi R, Singh N, Gadhe LG, Manchanda S, Shimozawa M, Nilsson P, Johansson J, Kumar A, Maji SK, Shanmugam M. Benzimidazole‐based Fluorophores for the Detection of Amyloid Fibrils with Higher Sensitivity than Thioflavin‐T J. Neurochem. 2021, 156(6), 1003-1019. doi: 10.1111/jnc.15138

Marathe S, Dhamija B, Kumar S, Jain N, Ghosh S, Dharikar JP, Srinivasan S, Das S, Sawant A, Desai S, Khan F, Syiemlieh A, Munde M, Nayak C, Gandhi M, Kumar A, Srivastava S, Venkatesh KV, Barthel SR, Purwar R. (2021) Multiomics Analysis and Systems Biology Integration Identifies the Roles of IL-9 in Keratinocyte Metabolic Reprogramming. J Invest Dermatol. doi: 10.1016/j.jid.2021.02.013.

Sharma, K., Mehra, S., Sawner, A. S., Markam, P. S., Panigrahi, R., Navalkar, A., Chatterjee, D., Kumar, R., Kadu, P., and Patel, K. Ray S, Kumar A, Maji SK  Effect of Disease-Associated P123H and V70M Mutations on β-Synuclein Fibrillation ACS Chem. Neurosci. 2020, 11, 2836-2848. doi:10.1021/acschemneuro.0c00405

Bishoyi, A. K.; Roham, P. H.; Rachineni, K.; Save, S.; Hazari, M. A.; Sharma, S.; Kumar, AHuman Islet Amyloid Polypeptide (HIAPP)–a Curse in Type II Diabetes Mellitus: Insights from Structure and Toxicity Studies Biol. Chem. 2020, 402(2):133-153. doi: 10.1515/hsz-2020-0174

Ray, S., Singh, N., Kumar, R., Patel, K., Pandey, S., Datta, D., Mahato, J., Panigrahi, R., Navalkar, A., Mehra, S.,  Chatterjee, D.,  Sawner, A. S.,  Maiti, S.,  Bhatia, S., Gerez, J. A., Chowdhury, A.,  Kumar, A., Padinhateeri, R.,  Riek, R.,  Krishnamoorthy, G, Maji S. K.,  α-Synuclein Aggregation Nucleates through Liquid-Liquid Phase Separation Nat. Chem. 2020, 12(8):705-716. doi: 10.1038/s41557-020-0465-9

Dubey R, Kulkarni SH, Dantu SC, Panigrahi R, Sardesai DM, Malik N, Acharya JD, Chugh J, Sharma S, Kumar A. Myricetin protects pancreatic β-cells from human islet amyloid polypeptide (hIAPP) induced cytotoxicity and restores islet function Biol Chem. 2020, 402(2):179-194. doi: 10.1515/hsz-2020-0176

Bhattacharya, A.; Shukla, V. K.; Hosur, R. V; Kumar, A. Backbone and Side-Chain Resonance Assignments of Centromeric Protein Scm3 from Saccharomyces Cerevisiae Biomol. NMR Assign.2019, 13, 267-273. doi:10.1007/s12104-019-09889-8 


Dubey, R.; Patil, K.; Dantu, S. C.; Sardesai, D. M.; Bhatia, P.; Malik, N.; Acharya, J. D.; Sarkar, S.; Ghosh, S.; Chakrabarti, R. Sharma, S., Kumar, A. Azadirachtin Inhibits Amyloid Formation, Disaggregates Pre-Formed Fibrils and Protects Pancreatic β-Cells from Human Islet Amyloid Polypeptide/Amylin-Induced Cytotoxicity Biochem. J. 2019 476, 889-907. doi:10.1042/BCJ20180820

Vasudevan, S. V; Kumar, AAntimicrobial Peptide ROAD–1 Triggers Phase Change in Local Membrane Environment to Execute Its ActivityJ. Mol. Model.2019, 25 (9), 281. doi:10.1007/s00894-019-4163-8

Mohite, G. M., Kumar, R., Panigrahi, R., Navalkar, A., Singh, N., Datta, D., Mehra, S., Ray, S., Gadhe, L. G., Das, S. Singh, N.,  Chatterjee, D.,  Kumar, A., Maji S. K.   Comparison of Kinetics, Toxicity, Oligomer Formation, and Membrane Binding Capacity of α-Synuclein Familial Mutations at the A53 Site, Including the Newly Discovered A53V MutationBiochemistry 2018 57, 5183-5187. doi:10.1021/acs.biochem.8b00314

Lv, G., Kumar, A., Huang, Y., and Eliezer, D. A Protofilament-Protofilament Interface in the Structure of Mouse α-Synuclein Fibrils.  Biophysical J. 2018, 114, 2811-2819. doi:10.1016/j.bpj.2018.05.011

Mehra, S., Ghosh, D., Kumar, R., Mondal, M., Gadhe, L. G., Das, S., Anoop, A., Jha, N. N., Jacob, R. S., and Chatterjee, D. Ray, S., Singh, N., Kumar, A.,  Maji, S. K.  Glycosaminoglycans Have Variable Effects on α-Synuclein Aggregation and Differentially Affect the Activities of the Resulting Amyloid Fibrils J. Biol. Chem.2018, 293, 12975-12991. doi:10.1074/jbc.RA118.004267

Rajpurohit, J.; Upadhyay, A.; Das, C.; Dubey, R.; Vaidya, S.; Krishnan, V.; Kumar, A.; Shanmugam, M. Unusual Methylenediolate Bridged Hexanuclear Ruthenium (III) Complexes: Syntheses and Their Application Inorg. Chem.2018, 57, 14967-14982. doi:10.1021/acs.inorgchem.8b02780

Agadi, N.; Vasudevan, S.; Kumar, A. Structural Insight into the Mechanism of Action of Antimicrobial Peptide BMAP-28 (1–18) and Its Analogue MutBMAP18 J. Struct. Biol. 2018, 204, 435-448. doi:10.1016/j.jsb.2018.10.003

Malik, N.; Dantu, S. C.; Shukla, S.; Kombrabail, M.; Ghosh, S. K.; Krishnamoorthy, G.; Kumar, AConformational Flexibility of Histone Variant CENP-ACse4 Is Regulated by Histone H4: A Mechanism to Stabilize Soluble Cse4 J. Biol. Chem.2018, 28;293(52):20273-20284. doi: 10.1074/jbc.RA118.004141

Jha, N. N.; Ranganathan, S.; Kumar, R.; Mehra, S.; Panigrahi, R.; Navalkar, A.; Ghosh, D.; Kumar, A.; Padinhateeri, R.; Maji, S. K. Complexation of NAC-Derived Peptide Ligands with the C-Terminus of α-Synuclein Accelerates Its Aggregation. Biochemistry 2018, 57, 791-804. doi:10.1021/acs.biochem.7b01090

hattacharya, D.; Kumar, A.; Panda, D WhmD Promotes the Assembly of Mycobacterium Smegmatis FtsZ: A Possible Role of WhmD in Bacterial Cell Division Int. J. Biol. Macromol.2017, 95, 582-591. doi:10.1016/j.ijbiomac.2016.11.056

Ranjan, P.; Ghosh, D.; Yarramala, D. S.; Das, S.; Maji, S. K.; Kumar, A. Differential Copper Binding to Alpha-Synuclein and Its Disease-Associated Mutants Affect the Aggregation and Amyloid FormationBiochim. Biophys. Acta (BBA)-General Subj.2017, 1861, 365-374. doi:10.1016/j.bbagen.2016.11.043

Shukla, V. K.; Singh, J. S.; Vispute, N.; Ahmad, B.; Kumar, A.; Hosur, R. V Unfolding of CPR3 Gets Initiated at the Active Site and Proceeds via Two Intermediates Biophys. J.2017, 112, 605-619. doi:10.1016/j.bpj.2016.12.020

Singh, J. S.; Shukla, V. K.; Gujrati, M.; Mishra, R. K.; Kumar, A Backbone and Side-Chain Resonance Assignments of Plasmodium Falciparum SUMO Biomol. NMR Assign.2017, 11, 17-20. doi:10.1007/s12104-016-9712-9

Khaneja, N.; Kumar, A Broadband Excitation by Method of Double Sweep Appl. Magn. Reson.2017, 48, 771-782. doi:10.1007/s00723-017-0894-9

Khaneja, N.; Kumar, A Two Pulse Recoupling J. Magn. Reson.2017, 281, 162-17. doi:10.1016/j.jmr.2017.06.004

Ranjan, P.; Kumar, A Perturbation in Long-Range Contacts Modulates the Kinetics of Amyloid Formation in α-Synuclein Familial Mutants ACS Chem. Neurosci.2017, 8, 2235-2246. doi:10.1021/acschemneuro.7b00149

Jha, N. N.; Kumar, R.; Panigrahi, R.; Navalkar, A.; Ghosh, D.; Sahay, S.; Mondal, M.; Kumar, A.; Maji, S. K Comparison of α-Synuclein Fibril Inhibition by Four Different Amyloid Inhibitors ACS Chem. Neurosci.2017, 8, 2722-2733. doi:10.1021/acschemneuro.7b00261

Dubey, R.; Minj, P.; Malik, N.; Sardesai, D. M.; Kulkarni, S. H.; Acharya, J. D.; Bhavesh, N. S.; Sharma, S.; Kumar, A Recombinant Human Islet Amyloid Polypeptide Forms Shorter Fibrils and Mediates β-Cell Apoptosis via Generation of Oxidative Stress Biochem. J. 2017,  474, 3915-3934. doi:10.1042/BCJ20170323

 

Khaneja, N.; Kumar, A Four Pulse Recoupling J. Magn. Reson. 2016,272:158-165. doi:10.1016/j.jmr.2016.09.019

Khaneja, N.; Kumar, A Recoupling Pulse Sequences with Constant Phase Increments J. Magn. Reson.2016, 271:75-82. doi:10.1016/j.jmr.2016.08.011

Kachariya, N. N.; Dantu, S. C.; Kumar, A Backbone and Side-Chain Assignments of Human Cell Cycle Regulatory Protein S-Phase Kinase-Associated Protein-1 Biomol. NMR Assign.2016,10(2):351-5. doi:10.1007/s12104-016-9699-2

Dhaked, H. P. S.; Bhattacharya, A.; Yadav, S.; Dantu, S. C.; Kumar, A.; Panda, D Mutation of Arg191 in FtsZ Impairs Cytokinetic Abscission of Bacillus Subtilis Cells Biochemistry 2016, 55(40):5754-5763. doi:10.1021/acs.biochem.6b00493

Malik, N.; Kumar, A Resonance Assignment of Disordered Protein with Repetitive and Overlapping Sequence Using Combinatorial Approach Reveals Initial Structural Propensities and Local Restrictions in the Denatured State J. Biomol. NMR 2016, 66(1):21-35. doi:10.1007/s10858-016-0054-9

Ranjan, P.; Kumar, A The Involvement of His50 during Protein Disulfide Isomerase Binding Is Essential for Inhibiting α-Syn Fibril Formation Biochemistry 2016,55(19):2677-80. doi:10.1021/acs.biochem.6b00280

Singh AK, Gajiwala AL, Rai RK, Khan MP, Singh C, Barbhuyan T, Vijayalakshmi S, Chattopadhyay N, Sinha N, Kumar A, Bellare JR Cross-correlative 3D micro-structural investigation of human bone processed into bone allografts Mater Sci Eng C Mater Biol Appl. 2016, 62:574-84. doi:10.1016/j.msec.2016.02.002

Shukla, V. K.; Singh, J. S.; Trivedi, D.; Hosur, R. V; Kumar, A NMR Assignments of Mitochondrial Cyclophilin Cpr3 from Saccharomyces Cerevisiae Biomol. NMR Assign.2016, 10(1):203-6. doi:10.1007/s12104-016-9667-x

Jacob, R. S.; Das, S.; Ghosh, S.; Anoop, A.; Jha, N. N.; Khan, T.; Singru, P.; Kumar, A.; Maji, S. K Amyloid Formation of Growth Hormone in Presence of Zinc: Relevance to Its Storage in Secretory Granules Sci. Rep.2016, 23;6:23370. doi:10.1038/srep23370

Sagar, N.; Singh, A. K.; Temgire, M. K.; Vijayalakshmi, S.; Dhawan, A.; Kumar, A.; Chattopadhyay, N.; Bellare, J.R. 3D Scaffold Induces Efficient Bone Repair: In Vivo Studies of Ultra-Structural Architecture at the Interface RSC Adv.2016, 6(96), 93768-93776. doi:10.1039/C6RA20420A

Chandra Dantu, S.; Nathubhai Kachariya, N.; Kumar, A Molecular Dynamics Simulations Elucidate the Mode of Protein Recognition by Skp1 and the F‐box Domain in the SCF Complex Proteins 2016,84(1):159-71. doi:10.1002/prot.24963

Please refer to Google Scholar for a full list of articles from 2015 and before.